There have been some ground loop and noise issues with the TC4 system, but that is unrelated to the new roaster interfaces.
With the TC4 system, when there are problems it has been associated with grounded thermocouples. What I think happens is that the roaster frame is floating, i.e., not earth grounded. If you measure the voltage between the roaster frame and earth ground with a DMM you will read a pretty high number -- usually 50 to 80 VAC. If the TC4 is powered by an AC source (like a wall wart or USB cable), you will measure a similar voltage difference between the GND plane on the TC4 and earth ground.
When you use grounded thermocouples then these two big voltages "meet" at the chip that reads the thermocouple signal. The chip takes a dim view of any voltages over 2.0VDC, so the readings get very flaky.
The best solution is to completely isolate/insulate the thermocouples from everything (except of course the TC4 or other measuring instrument). In particular, there should be no path from either of the thermocouple wires to earth ground or to the roaster.
A solution that has also worked is to tie the roaster frame to the GND plane on the TC4. This forces the roaster frame, thermocouples, and TC4 to all be referenced to the same voltage. On my roaster I used a series 1K resistor to give a little protection to the USB port on my computer. A 10K series resistor is probably safer.
For some reason, the thermocouples on eBay with all of the braided shielding have really been a problem.
Jim